TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.1.207.1
Two uncharacterized FtsX-like proteins, (1220 aas [A0ECD8] and 1209 aas [A0ECD9], respectively; both with 10 TMS in a 1+3 + 2 + 1 +3 TMS arrangement; 2-4 are homologous to 8-10; the FtsX domain; P. tetraurelia has at least 5 paralogues.) Three ATPases appear to most closely resemble the ABC3 ATPase of 3.A.1.207.7; two of these are very similar (95% identity), having the same size (295 aas) (A0BKU3 and A0E2Z0) while the third is larger (350 aas) (A0CMB8) and shows only 45% identity with the other two.  We suggest the first two very similar proteins function with the two FtsX-like proteins while the third (A0CMB8) serves an idependent function. However, this has not been established.

Accession Number:A0BKU3
Protein Name:ABC transporter domain-containing protein
Length:295
Molecular Weight:33513.00
Species:Paramecium tetraurelia [5888]
Substrate Unknown

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MIFSGSPDKE ALQGQGRDIY NLPSKEFGPD DENVIECEDV SKEFNLIGRD EKIYALKEIN 
61:	LKQHDEFYPI KRGEFVIIRG PSGGGKTTFL NQVGTIDTPT SGTIRLLGRE VNKLSKDSYL 
121:	SDLRLTTIGF VFQTFNLIAT MTAYENVELP MRILAKLSEK EIKKRVRELL KSVGLQDRMD 
181:	HLPSELSGGE QQRVAIARSL ANSPQILLLD EPTGDLDSKS TVEVMDILLK LNNFGYNESN 
241:	HIPCTMVMVT HNPDLECYAH RIIYIKDGKI EKQAINERQS PLRYEQYLHY LNSQN