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3.A.1.105.21
Uncharacterized ABC transporter with two components, a transmembrane protein with 6 TMSs and an ATPase. The substrate in unknown.

Accession Number:AKM80417
Protein Name:AKM80417.1 ABC transporter permease [Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17]
Length:267
Molecular Weight:
Species:Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 [1619070]
Number of TMSs:6
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence 
1:	MAVKLEIDTR PKFVLAVVDS LVMIRRSSTH IIRNTDQLLG TFFQPIMFLV LFTSVFGGAI 
61:	ATGGGSYVNF LMAGIIVQTI AFGSTTTAIA ICNDLQKGIV DRFRSLPMSN LAVLNGHVVS 
121:	DLFRNGISTI VMLLAGLVIG FRPTADFGEW LTIVGLLALF TLSISWLSAI VGVVAKSVEG 
181:	VQWLTFVVIF PLTFASTAFV PAESMSSWLK PFAENQPVSH MVDAIRALLV GTPAGDSILW 
241:	SIVWSLGILI VSIPVAAWLF KRKTTQ