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3.A.1.158.4
Putative 4 component ABC system with 3 membrane proteins, all with 6 TMSs, and one ATPase, all encoded by genes that are adjacent to each other.

Accession Number:HCO29005
Protein Name:HCO29005.1 TPA: hypothetical protein DIT54_06245 [Lachnospiraceae bacterium]
Length:266
Molecular Weight:
Species:Lachnospiraceae bacterium [1898203]
Number of TMSs:6
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKKFRRQIIY DLRAGTIQYW KQYSVIFLFF LLLHFIFITS YQGENSLSYF DYIWNFVKGI 
61:	PPFAGADRNQ SFSIPMEWAV LHIICMFMNL KYPYIDLYER NIQFFIYSAS RRNWWLSKCI 
121:	WVVMNTVIYY SFFWLGAAVV NFIRQGGVSS QILIEINPWK QVLMIFVLPI FVSIAVGMVA 
181:	VVFTVFLNPI IGMIVGLGIY IASVYWENSI LIGNYSMIIR NYWVKGEGEI HTVKGILFSI 
241:	IIILFTIAAG SLMIQKKEID RKGKE