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3.A.1.158.4
Putative 4 component ABC system with 3 membrane proteins, all with 6 TMSs, and one ATPase, all encoded by genes that are adjacent to each other.

Accession Number:HCO29007
Protein Name:HCO29007.1 TPA: hypothetical protein DIT54_06255 [Lachnospiraceae bacterium]
Length:267
Molecular Weight:
Species:Lachnospiraceae bacterium [1898203]
Number of TMSs:6
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MRQVLKNECK RAFFNKGMLL GLGVGIGIAL WHAWQYILAP DVESVNVFCM ESVFYNWIGA 
61:	SSYPIQSYLY YFILPLLAVL PAGTSLYQDL HTGYIRQVYT RISRKDYFIA KYISVFLSGG 
121:	FVVTVPLLLN FYMAMVRFPL LKPEPIMDYG PDRTSFGFEF YYSHPVVHTV IFLIITFLFA 
181:	GGFAGIACLT TYYTEYKIVV WLTPFVCYYF LFVLQALIKN DKIMIAPNYF LIPGFSLNTI 
241:	WDYIGGIVLF LIVAIWCYRK GSVYER