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3.A.1.207.10
Putative ABC3 transporter of 1365 aas (ABC membrane protein of 10 TMSs; KAF2072454); plus an ABC3-type ATPase of 445 aas; KAF2077445).  It is not known that these two proteins function together, but they both cluster with ABC3 transporter constituents.

Accession Number:KAF2072454
Protein Name:KAF2072454.1 hypothetical protein CYY_006230 [Polysphondylium violaceum]
Length:1366
Molecular Weight:
Species:Polysphondylium violaceum [133409]
Number of TMSs:11
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSKNYDDHKS HLLGDNHDGF GEFDSSFNNT FQSNSNSPQF NNGSSKYQKL RDEDMDDNDD 
61:	SSPSTYSNPH TDSPFLKSNG LGGKTSSLSS FETFSLGHGH KIDREKDDGS SSFNMSTVKG 
121:	FFQYLYVSLR YTLYGDLRVA LKYVHNNSKR NKKSLLLGLF TIFLVVLFIS FLQNLIQASP 
181:	IVFLKLSEDQ TGELDLVITG DPNNYGSANT SLLLATPVYE TSSEEAQYNK VDTREKLAEA 
241:	MDENDFNGVS TDQQISRATS LLDVVKDTVA SVNNQLNFIG DLSGYFVNST FLNQTLYGAS 
301:	TVHGVAPRWL SIGNIKNANT DISASLILMV MNTNLEKSLN LGRGWTHPAL VGNQIHITKS 
361:	FLTRIGVEPN KGESVHLHMS FVDVLERLGT QALPTVKDIT NVIEQYTQQP IPDSFNITAL 
421:	VDIYQSIYPS KNMTQVLTDM FDNGINITKI DATTYSYIIF PKIIISNYYS FFENDLTIDK 
481:	ELVVVDAIKS SGGKFPNSIG NVGVLESSFV EQLIVEKLDN ISQQLNSSVF QNIVQLAEFV 
541:	ESIYPNNNYS MIIDQVINLQ DRITNFTRQF KIDYYSMSSV VMLQNRVKIY TASDQEMMNG 
601:	FMAFTNQIAS RLGYSYPVTF TTPLSTTVQM FMYTKLSLNQ IFNCVATVLL VLGALMIYSL 
661:	LLSDVEGKTF EYGMLRAQGM RHYALILLLL SQALYFSIPG IIFGLFFGWC VYSVVAYFVY 
721:	CKFVLLPIDL TFYSTSIISG LFMGLLMPIV ANIAPIQRAL SRTLRDALDV YHQVKNETIV 
781:	KIMKLEEIGL DVLQTLLAVM AVGVGFTVYY LIPLSFTFRN YGLFFGILTG ILMGMLFGMS 
841:	MLAQAIQPFV EKAVIFCLIL GKDRKSLYNL VRKNLFSHSS RNSKTATMLT ISLTFVIFTG 
901:	CVFRLQGHNI QELVRLGIGS DVAVVATSTF NPIPEDKIRA FLDNDIANNT QSIVTSYSTV 
961:	TFPLDKIMNI RSTHLTTLAS YPDVPVRVYG VEQNFLSSVF LDFYDYTELS KSLNFPSIKG 
1021:	TSTPDVISSL YVNQHKQTIP EDVGGVIVPP PSVISNGSVL YEPDNPIWWW VRNHLNNTYV 
1081:	YKNYTDMVIS EAFRLTSGAD TNTPFSLVIK YKQFEGALNV LNLLSKPQSM VGMFPSFFFS 
1141:	TYSQTSWNSP VLVNIDEFYN IMNLVFSLTS DPAVQLPAVP PKSKILVKLK ASATQSQRDN 
1201:	VINGIRNFIK TDNIQVVDTQ FLLNNTETAI TILNLFFYVV SSASIILCFF MLWVSFSANI 
1261:	HENSWEFGVL RSIGLTSFQV TRVYIYEALV LIFSSMILGL CIGLGIALTL TLQFDLFTEL 
1321:	PFSFEFPYIM FIGVLISSIF IAIFVSYQSS KEYRERMIAS VLKGK