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3.A.1.207.10
Putative ABC3 transporter of 1365 aas (ABC membrane protein of 10 TMSs; KAF2072454); plus an ABC3-type ATPase of 445 aas; KAF2077445).  It is not known that these two proteins function together, but they both cluster with ABC3 transporter constituents.

Accession Number:KAF2077445
Protein Name:KAF2077445.1 hypothetical protein CYY_001218 [Polysphondylium violaceum]
Length:446
Molecular Weight:
Species:Polysphondylium violaceum [133409]
Number of TMSs:2
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MSNIMVEEKS PDEKFFGQVR LKQDDSVDFN DPENILTMKN IHKTYLLGIE GVPALRGVSM 
61:	SIKRGEFICI FGTSGGGKTT MLNIIGTIDK PTKGDMKLCG KMINHKTTDK DLAFLRLKNI 
121:	GFVFQTFNLL SSLTALENVE MPMILLGELS ASERRERAIS LLTKVGMKDR LDHFPSQLSG 
181:	GEQQRVTIAR AIANNPDILL LDEPTGDLDT VNTSIIMKLL TDLNKNENIT LVMVTHDVGL 
241:	KMYSDRIIWM RDGKIQRIET VPLKSKEDQF QKLYKEVDSI QRNQKNGVHS VFVSSNSDEN 
301:	ENQVMNNNNN NSSSSSSSNS NSKSKISEYR KPTDYKSIAS YTSPVEINFN AAQNILKSST 
361:	FNNNNSKNNN DKNHTIIESS SISPPYFNNQ SISSPASTDS LNNIANATIY GNSGDVYLDI 
421:	NENNSLISKN DQDVDSLSKN IERIL