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3.A.1.2.4
Xylose porter

Accession Number:P0AGI4
Protein Name:Xylose transport system permease protein XylH aka B3568
Length:393
Molecular Weight:41031.00
Species:Escherichia coli [83333]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Xylose

Cross database links:

Genevestigator: P0AGI4
EchoBASE: EB2185
EcoGene: EG12276
eggNOG: COG4214
HEGENOM: HBG663180
RefSeq: AP_004224.1    NP_418025.1   
Entrez Gene ID: 948083   
Pfam: PF02653   
BioCyc: EcoCyc:XYLH-MONOMER    ECOL168927:B3568-MONOMER   
KEGG: ecj:JW3540    eco:b3568   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0015591 F:D-ribose transmembrane transporter activity
GO:0015148 F:D-xylose transmembrane transporter activity
GO:0015752 P:D-ribose transport
GO:0015753 P:D-xylose transport

References (4)

[1] “Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes.”  Sofia H.J.et.al.   8041620
[2] “The complete genome sequence of Escherichia coli K-12.”  Blattner F.R.et.al.   9278503
[3] “Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.”  Hayashi K.et.al.   16738553
[4] “Global topology analysis of the Escherichia coli inner membrane proteome.”  Daley D.O.et.al.   15919996

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MSKSNPSEVK LAVPTSGGFS GLKSLNLQVF VMIAAIIAIM LFFTWTTDGA YLSARNVSNL 
61:	LRQTAITGIL AVGMVFVIIS AEIDLSVGSM MGLLGGVAAI CDVWLGWPLP LTIIVTLVLG 
121:	LLLGAWNGWW VAYRKVPSFI VTLAGMLAFR GILIGITNGT TVSPTSAAMS QIGQSYLPAS 
181:	TGFIIGALGL MAFVGWQWRG RMRRQALGLQ SPASTAVVGR QALTAIIVLG AIWLLNDYRG 
241:	VPTPVLLLTL LLLGGMFMAT RTAFGRRIYA IGGNLEAARL SGINVERTKL AVFAINGLMV 
301:	AIAGLILSSR LGAGSPSAGN IAELDAIAAC VIGGTSLAGG VGSVAGAVMG AFIMASLDNG 
361:	MSMMDVPTFW QYIVKGAILL LAVWMDSATK RRS