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3.A.1.2.4
Xylose porter

Accession Number:P37387
Protein Name:XylF aka XYLT aka B3566
Length:330
Molecular Weight:35734.00
Species:Escherichia coli [83333]
Location1 / Topology2 / Orientation3: Periplasm1
Substrate Xylose

Cross database links:

Genevestigator: P37387
EchoBASE: EB4153
EcoGene: EG20252
eggNOG: COG4213
HEGENOM: HBG531827
RefSeq: AP_004226.1    NP_418023.1   
Entrez Gene ID: 948090   
Pfam: PF00532   
BioCyc: EcoCyc:XYLF-MONOMER    ECOL168927:B3566-MONOMER   
KEGG: ecj:JW3538    eco:b3566   

Gene Ontology

GO:0042597 C:periplasmic space
GO:0048029 F:monosaccharide binding
GO:0015752 P:D-ribose transport
GO:0015753 P:D-xylose transport

References (5)

[1] “Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes.”  Sofia H.J.et.al.   8041620
[2] “The complete genome sequence of Escherichia coli K-12.”  Blattner F.R.et.al.   9278503
[3] “Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.”  Hayashi K.et.al.   16738553
[4] “Molecular genetics of a receptor protein for D-xylose, encoded by the gene xylF, in Escherichia coli.”  Sumiya M.et.al.   8581399
[5] “Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.”  Link A.J.et.al.   9298646
Structure:
3M9W   3M9X   3MA0     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MKIKNILLTL CTSLLLTNVA AHAKEVKIGM AIDDLRLERW QKDRDIFVKK AESLGAKVFV 
61:	QSANGNEETQ MSQIENMINR GVDVLVIIPY NGQVLSNVVK EAKQEGIKVL AYDRMINDAD 
121:	IDFYISFDNE KVGELQAKAL VDIVPQGNYF LMGGSPVDNN AKLFRAGQMK VLKPYVDSGK 
181:	IKVVGDQWVD GWLPENALKI MENALTANNN KIDAVVASND ATAGGAIQAL SAQGLSGKVA 
241:	ISGQDADLAG IKRIAAGTQT MTVYKPITLL ANTAAEIAVE LGNGQEPKAD TTLNNGLKDV 
301:	PSRLLTPIDV NKNNIKDTVI KDGFHKESEL