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3.A.1.2.14
Putative L-arabinose porter (Rodionov et al. 2010).

Accession Number:Q0HIQ7
Protein Name:ABC transporter related
Length:500
Molecular Weight:54492.00
Species:shewanella sp. (strain mr-4) [60480]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Arabinose

Cross database links:

eggNOG: COG1129
HEGENOM: HBG758042
RefSeq: YP_734117.1   
Entrez Gene ID: 4252560   
Pfam: PF00005   
KEGG: she:Shewmr4_198   

Gene Ontology

GO:0005524 F:ATP binding
GO:0016887 F:ATPase activity

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MSLILELKQI SKHYPGVKAL EDVSLRLFAG EVHALLGENG AGKSTLVKVM TGAQSKDMGD 
61:	ILFLGEPQHF NTPMDAQKAG ISTVYQEVNL VPNLTVAQNL FLGYEPRRLG LIHFKKMYAD 
121:	ARAVLTQFKL DIDVSAPLSD YSIAVQQLIA IARGVAMSAK VLVLDEPTAS LDAKEVQVLF 
181:	GILNQLKAKG VAIVFITHFL DQVYQISDRI TVLRNGQFIG EYLTAELPQP KLIEAMLGRS 
241:	LQEQLVDKQE KERTVTRAEA VLLSLKDVSV KGSIQSMNLT VPKGQAVGLA GLLGSGRSEV 
301:	CNAVFGLDLV DSGSIHLAGQ KLNLSQPVDA ISAGIALCPE DRKIDGIIGP LSIRENIILA 
361:	LQARIGWWRY LSKARQQEIA QFFIDKLQIA TPDADKPIEQ LSGGNQQKVI LARWLAIEPI 
421:	LLVLDEPTRG IDIGAHAEIV KLIRTLCDEG MSLLVASSEL DELVAFSNKV VVLRDRYAVR 
481:	ELSGAELTSQ HVMQAIAEGK