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3.A.1.5.28
The Nickel (Ni2+) uptake porter, NikZYXWV (Howlett et al., 2012).

Accession Number:Q0P845
Protein Name:Putative peptide ABC-transport system permease protein
Length:314
Molecular Weight:36028.00
Species:Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168) [192222]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Ni2+

Cross database links:

HEGENOM: HOG000170243
Entrez Gene ID: 905853   
Pfam: PF00528   
KEGG: cje:Cj1583c   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005215 F:transporter activity

References (1)

[1] “The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences.”  Parkhill J.et.al.   10688204

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MLKRLVFSIF IAFFSTFLCF VLLHFSKGSI AYANGVNSQS KEFVQRIEQN LGLDKPLLEQ 
61:	YKIWLFKALK GDLGVSFLSG ESVLKLIKER IFNTFILGFS ALMLLFLLSV FLALLGYYYK 
121:	ESFIDKIITF LAFNFFALPP FVLALLFVLI FGIFWKILPV MGSSDIGFED DFLNRLEHLI 
181:	LPVLVLVLSH LALFLRIARN FINESFSQIF IQNLYARALR EKDIYFLVLK YSLSPIVAYF 
241:	GGSALSFMMG TYVVESVFAY KGLGSLLFKS IIFKDYPIVL ALIFFSVLLA AFFTFLSDIV 
301:	ARILNPRLRR LDFV