TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.1.144.2
Functionally uncharacterized ABC2 transporter #2.  This system is encoded by two genes that overlap and are therefore probably translationally coupled; they are in the same operon with the genes for 2.A.1.144.1.

Accession Number:Q0W8T6
Protein Name:Predicted ABC-type transport system, permease component
Length:267
Molecular Weight:29656.00
Species:Uncultured methanogenic archaeon RC-I [351160]
Number of TMSs:6
Substrate Unknown

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MNKIWLIIEK EFEEIMKNKI ILFSILFMPF IFSVFIPSAM LVPMIISPEE FNQSLNASGT 
61:	GSLNFDGGIS AITTQEGMIS FMVRATLPFF MMLPAMLPTI ISSYSIIGEK KNRTLEPLLA 
121:	APVSVQDIMI GKAISALLPA LAATWIAAVI YSAVVWFLTR DIVHEVLVPD MIWLIGLFIL 
181:	APMLAFLGVM ITVIISSRVS DPRTAQQVSV VLVLPLVGLF IAQLAGFFML DERTILIACL 
241:	VVFIADLAVI RIGSKLFDRE EILTRWR