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3.A.1.1.6
Cyclodextrin porter

Accession Number:Q48395
Protein Name:CymE
Length:409
Molecular Weight:45666.00
Species:Klebsiella oxytoca [571]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Cyclodextrin

Cross database links:

Pfam: PF01547   

Gene Ontology

GO:0005215 F:transporter activity
GO:0006810 P:transport

References (1)

[1] “Genetics of a novel starch utilisation pathway present in Klebsiella oxytoca.”  Fiedler G.et.al.   8594196

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKIKLLDAVL LFGLTALVPA AWGESIAPEK QANLLIWTDI STLDYMKYAA ENFNKTYNSQ 
61:	VRFTFRGLAP IDAASRMIQD GGSTRVADVA EIEHDLLGRL VVAGGVMENL ISAERINKKF 
121:	MSNAINASRY EGNNYGFPVS YATVALFYNK DILRLPPDKF EELIQLSAEF NNVKENKYTL 
181:	LWDVQNYYES RMFLTLYGAY EFGQEGTNVK DLGINSELAQ KGLAAMKRLK TANPSNPVDM 
241:	RNPQVRRGLF SEGKVAAIID GPWAIQGYNN SKINFGVVPI PTLEGKQPRS FSTVRLAVVS 
301:	SYSKSPKAAQ LFADYLSSDE MLMKRYEMTE SIPPVPNLMN KILPTANEAT SAIIKQGLHS 
361:	DAMPSIPEMG YLWSPLANAI TDMWINDQTP KAALDRARNI IDEQIKFQE