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3.A.1.1.6
Cyclodextrin porter

Accession Number:Q48396
Protein Name:CymF
Length:427
Molecular Weight:48061.00
Species:Klebsiella oxytoca [571]
Number of TMSs:8
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Cyclodextrin

Cross database links:

Pfam: PF00528   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005215 F:transporter activity
GO:0006810 P:transport

References (1)

[1] “Genetics of a novel starch utilisation pathway present in Klebsiella oxytoca.”  Fiedler G.et.al.   8594196

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MLLSEGKSMR IFPASFLIMG ATQLISGHWI KGSVFLLFQI VVISNINLLL NATQGLITLG 
61:	TVAQTRSGFD IVAGDNSIFM LVEGVVAFIF LFFSIFVYWL NIKDAQVCEK CHQSFTEQLR 
121:	TIYDNRFATI MLAPAFIACI AFIIMPMIIT VLVSLTNYSA PHHIPPKNLV DWVGLKNFIT 
181:	LFELRIWSKT FVGIGVWTVL WAFFATLCTC SFGFLLALAL ENKKIIAKKA WRVVFILPYA 
241:	IPAFVTLLIF RLLLNGIGPV NSTLNSWGID SIGFLSDPLI AKMTVIAVSV WVGAPYFMLL 
301:	ITGAMTNIPR DLYEASEVDG ASKFQQFREI TLPMVLHQVA PSLVMTFAHN FNNFGAIYLL 
361:	TEGGPINPEY RFAGHTDILI TWIYKLTLDF QQYQIASVIS IIIFLFLSIF AIWQFRRMKS 
421:	FKEDVGM