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3.A.1.2.22
ABC sugar transporter that plays a role in the probiotic benefits through acetate production (Fukuda et al. 2012).

Accession Number:Q8G3Q9
Protein Name:Probable ABC transport system permease protein for sugars
Length:405
Molecular Weight:42380.00
Species:Bifidobacterium longum (strain NCC 2705) [206672]
Number of TMSs:12
Substrate Sugars

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSAATATPAK KEEKTGLLAT VANNARQYGI VGALLIIVVA FEILTGGVLL KPNSFVSLIQ 
61:	QNAYVIILAI GMVMVIIATH IDLSVGSLVA FIGGVCALLM ERAGVNWMLA IVIALVVGLI 
121:	VGVWQGFWVA VIGIPGFITT LAGMLIFRGL ATVIVGESVP ITSLEFRGIA RNYLPNILGW 
181:	WGPFDGLTIV LGILCIVGFA WSQLRKRARV AKVGLVPEPM SLTVLKIVLV AVVIAFVTYL 
241:	LASSGNADQG GTPIMLVIVG VLVFIYNFIL TKTVFGRHVY AVGGNRKAAI LSGINTRRVD 
301:	FLLFVHMGFL SAVAAVCMLS RLASATAQAG MEFEMDAIAA CFIGGTAVTG GIGTIPGAVI 
361:	GAFVMGVINQ GLSIMGVDTA VVKTIKGLVL LLAVAVDIIS KRKKS