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3.A.1.2.22
ABC sugar transporter that plays a role in the probiotic benefits through acetate production (Fukuda et al. 2012).

Accession Number:Q8G3R1
Protein Name:Probable sugar binding protein of ABC transporter for pentoses
Length:385
Molecular Weight:41813.00
Species:Bifidobacterium longum (strain NCC 2705) [206672]
Number of TMSs:1
Substrate Sugars

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MKFTKKIVAV VAGVAMCAGL AACGGSRSGQ ATGGDAKIEK GATIGISMPT KSEERWNKDG 
61:	NNLKAKLEKA GYKVILSFAD DKPAQQNADI ENMVNNDAKI VVVASKDGTA VGPAVEKARD 
121:	AGAKVIAYDR LIMNTDAVDY YATFQLEQVG VLEATYLIDQ LKLKDGATGP FNIELFTGSP 
181:	DDNNAKYFFK GAWDLLQPYF EKGVLVSPSQ HGQGGVTKDF TVEDWQKISV MSWKTEQAQK 
241:	DMESILDSTY AHGEKLDAVL TPYDGIAQGV INAIESKRPD MKPGTDSWPY ITGQDAMEIA 
301:	VANIAKDKQG QTVFKDVNKL ADAVYDMIVE IAEGKEVSGL NGKFNNNNID VPSKLLDPQN 
361:	ITKDNLQDLV TANYITQDRF DELTK