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3.A.1.132.1
The GldAFG putative ABC transporter required for ratchet-type gliding motility; may function in secretion of a macromolecule such as an exopolysaccharide. (Agarwal et al., 1997; Hunnicutt et al., 2002; McBride and Zhu 2013). Soluble GldG homologues (no TMSs) are found in eukaryotes (e.g. intraflagellar protein transporter, IPT52 of Chlamydomonas reinhardtii; XP_001692161)

Accession Number:Q93LN1
Protein Name:GldF
Length:241
Molecular Weight:26913.00
Species:Cytophaga johnsonae (Flavobacterium johnsoniae) [986]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Vacuole membrane1 / Multi-pass membrane protein2
Substrate Exopolysaccharides, macromolecules

Cross database links:

RefSeq: YP_001195063.1   
Entrez Gene ID: 5090518   

References (1)

[1] “Mutations in Flavobacterium johnsoniae gldF and gldG disrupt gliding motility and interfere with membrane localization of GldA.”  Hunnicutt D.W.et.al.   11948149

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MKSIILREIK SFFGSPIGYL VIAIFLISNG LFLWVFEGDY NILNTGYADL TPFFTLTPWI 
61:	LIFLIPAVTM RSFSDERKQG TLELLLTKPL SIWQIVNGKF LGSFFLIILA IIPTFIYVKV 
121:	ISSLGSPEGN IDMGSTIGSY FGLLFLIASY SAIGIFTSTL SENQIVAFII AVFICFLFYF 
181:	GFEGLASLVP GQSNIISAFG MQDHFKSMSR GVIDTRDVIY FLSISVLFLS FTVYQLKSFK 
241:	A