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1.I.3.1.1
The bacterial (Planctomycetes) Nuclear Pore-like Complex, B-NPC (Sagulenko et al. 2017). Several proteins were found to associate with the pore-containing membranes, and some were found to possess structural domains found in eukaryote nuclear pore complexes (Sagulenko et al. 2017).  Six proteins, shown to be associated with the B-NPC structure, are listed under this TC#.  They show sequence similarity with members of autotransport families 1 and 2 (TC#s 1.B.12 and 1.B.40) as well as members of a bacterial pore-forming toxin family (e.g., TC# 1.C.75). However these proteins have an unusual amino acid composition with lots of As, Gs, D, and Es, possibly (partially) accounting for the good scores.

Accession Number:WP_081471983.1
Protein Name:WP_081471983.1 peptidase S8 [Gemmata obscuriglobus]
Length:704
Molecular Weight:
Species:Gemmata obscuriglobus [114]
Number of TMSs:1
Substrate small molecules, macromolecules

Cross database links:

External Searches:

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  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MESLEDRLTP VYDPSLPLGP QVAAGDILGD RVTVVMNSGA SSAVLSAAPF ATEARSLGFN 
61:	IYSVRLAAGT DLTNAIAYLA AQPGVQAAEP DLVVRADRRP NDTDYKSLYG IPLTGTNLAW 
121:	NVSTGNPDFV IAVIDSGVDY THPDLAANIW TNLGEIPDNG VDDDGNGYVD DVHGYNFSNN 
181:	TGDPLDVDPH GTHVAGTIGA VGNNGDGVTG INWNVKIMAL NFLGTGPDSG ALSGAIASLN 
241:	YAVTMGAKVS NNSWGSDGGG RSAAFTAALT AARDAGHIFV SSAGNGGFDG VGDNNDQNPL 
301:	RMPSNYSTQF DNVIAVAAID NNNQLGSFSN YGVRTVTLAA PGVQILSTVP GGGYDTYDGT 
361:	SMATPHVAGA IALYWGANPT LTYQQVIDKL KSSVDVYPNL IGKVATGGRL NVANMFDYVP 
421:	TIPPVVVPAP VGSDVVRVLA PGGTTELALT PHPGYMGGVT IASGDVTGDG VADAVTAASF 
481:	GGHVKVFDGA TGAELRSFYA FAGYRGPIDL AVGDVNGDGI GDIIVAANLN GHIKVFDGRT 
541:	GAMTFSQFVY AGYAGAIKVS VADTNGDGVS ELITAAEGGL GVHVKTFAAG TQTLRDSFLA 
601:	TPPGFWKDFS LSAFDMDGDE VAELLVSQGP RVRVVNAETK AVRADFLAFD PLSNVPVVVQ 
661:	AGQFKGNNKP QLVVIAEPQG KSHVKVFDGP DFTLYDSFYA GTR