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1.A.1.5.13
Trout cyclic nucleotide-gated cation channel α3 (CNGA3 or CNG3). Expressed in inner ear cell cells where it binds to an intracellular C-terminus domain of EMILIN1 (Selvakumar et al., 2012). 

Accession Number:G9BHJ0
Protein Name:Cyclic nucleotide gated ion channel alpha 3 variant 3
Length:712
Molecular Weight:82167.00
Species:Oncorhynchus mykiss (Rainbow trout) [8022]
Number of TMSs:4
Substrate cations

Cross database links:

Pfam: PF00027    PF00520    PF06459   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005219 F:ryanodine-sensitive calcium-release channel activity
GO:0006874 P:cellular calcium ion homeostasis

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MAKICTEQSY PATTRQRPSL CTPNDNLDSI ENGTPRSNSE CEDTSSEIQG AVSVLTSRHP 
61:	EPHRDSFTGS GALARMHREV ERPDSFLGRF RTPELKEASS RESNTRSQGY PDRVRKRNKK 
121:	DDKKDEIKKE EKKQEAQEDE KKEEEKEEKK EEEKEEKKEE EPKKEEPKKE EPKKEEKKKE 
181:	EPPKEIWIMD PSADKYYTWL TIIAAPCFYN LMMLVTRACF NELQNTYTML WIVLDYTSDL 
241:	VYYADTFVRS RTGYLEQGLL VKDKQKLLDK YRQTAQFKWD VISMIPTDLL FLKVGINNPE 
301:	LRLNRLTKMN RLFEYFDRTE TRTSFPNVFR ISNLVLYILI IIHWNACIFF AISKTIGFGS 
361:	DTWVYPNISH PEHGRLARKY IYCLYWSTLT LTTIGETPPP VRDFEYLFVV ADFLIGVLIF 
421:	ATIVGNVGAM IANVNKNRAD FQAKIDSIKQ YMQFRKVSKD LEARVIKWFD YLWTEKKTCD 
481:	EEEVLKNLPD KLKAEIAIDV HLDTLKKVKI FQECEAGLLI ELVMKLQPQV FSPGDYICKK 
541:	GDIGREMYII KEGKLTVVAE DGVTQWCVLS DGAYFGDISI LGIKGSKAGN RRTANIRSVG 
601:	YSDLFALSKD DLMEALTEYP EAKKILEEKG KATLMKDNMI DEEIANAGAD PKDMEEKILR 
661:	LESNMEIMTS KLAKIMAEFT SGQGKIKQRI TDMESTVKSV RPEDISEVVA DK