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1.A.1.5.30
Hyperpolarization-activated cyclic nucleotide-modulated cation channel splice variant ABs-II of 682 aas and probably 6 TMSs, Ih channel encoded by the PIIH gene (Ouyang et al. 2007). 

Accession Number:Q06IP1
Protein Name:Hyperpolarization-activated cyclic nucleotide-modulated cation channel splice variant ABs-II
Length:682
Molecular Weight:77730.00
Species:Panulirus interruptus (California spiny lobster) [6735]
Number of TMSs:4
Substrate cations

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MNYRDVSKVH FGGDDVSLYG TPKEELGPGQ LCVGAAGAPP GVEPKPSFLK NQLQALFQPT 
61:	DNRLAMKLFG SKKALMKERI RQKAAGHWII HPCSNFRFYW DLCMLFLLVA NLIILPVAIS 
121:	FFNDDLSTRW IAFNCLSDTI FLIDIVVNFR TGIMQQDNSE QVILDPKLIA RHYLKTWFLL 
181:	DLISSVPLDY IFLIFNKYRD KEDFNESFQI LQAGRALRIL RLAKLLSLVR LLRLSRLVRY 
241:	VSQWEEVYVS SFLNMASVFM RIFNLISMML LIGHWSGCLQ FLVPMLQGFP SNSWVAINEL 
301:	QDSFWLEQYS WALFKAMSHM LCIGYGRFPP QSLTDMWLTM LSMICGATCY ALFLGHATNL 
361:	IQSLDSSRRQ YREKLKQVEE YMAYRKLPRE LRTRITEYFE HRYQGKFFDE EMILGELSEK 
421:	LREDVINYNC RSLVASVPFF ANADPGFVSE VVTKLKYEVF LPGDIIIKEG TIGNKMYFIQ 
481:	EGIVDIVMSN GEVATSLSDG SYFGEICLLT NARRTASVRA ETYCNLFSLS VEHFNTVLDS 
541:	YPLMRRTMES VAAERLNKIG KNPSIVSNRE DLTNDCKTVN AIVNALASVA STEQCDGGTS 
601:	SEESMMGHDG SSMKGGGRHH HHHHHHNLLD LGSIGKALAK GHLPRPKSEN NFALSLDTPS 
661:	PLNRNRPSFH KSDTFHKDTS FQ