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1.A.10.2.4
Probable Ionotropic glutamate receptor (GluR)

Accession Number:B5FDH7
Protein Name:Glutamate-gated potassium channel
Length:366
Molecular Weight:41616.00
Species:Vibrio fischeri (strain MJ11) [388396]
Number of TMSs:4
Substrate ions

Cross database links:

HEGENOM: HBG303236
Entrez Gene ID: 6807013   
Pfam: PF00060    PF00497   
KEGG: vfm:VFMJ11_1171   

Gene Ontology

GO:0016020 C:membrane
GO:0030288 C:outer membrane-bounded periplasmic space
GO:0005234 F:extracellular-glutamate-gated ion channel activity
GO:0004970 F:ionotropic glutamate receptor activity

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MQGDRGKRLW YRGAVRLFSI LLIFSSFFTQ AQPQLKVGAY HCPPFIFESS AEQYDGLSMI 
61:	LWQRIAEIMQ VEYKVSHYGL QELLSAAEVG EIDVGVSCIS ITPDREEHVD FSHSFYETHL 
121:	AIAVKNRSYL DSFISIITNK TLWKAIGIFL FVAISVGAFY YFLERKNNDK LYSMPTKRGR 
181:	IAEAFILGVL FITKGPFNYF EFKTLSARVV TVLIAMFSTV FIASITAVLA SSLTLEQLRF 
241:	DVKGINDLSK VKTGAKQGTT ASLLLSNHSI AHDTYKDMDS LLLALEEGKL DAVVADDAVL 
301:	RYMIKQGKSK ELFLDLTVLP YQLEKQNYGL VLIENSPYEE KINRALLQVR ETNEWHQILL 
361:	EYFAEK