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1.A.103.1.1
The Parainfluenza Virus 5 (Simian Virus 5) viroporin, SH, of 44 aas and 1 C-terminal TMS. Transports monovalent cations (Hyser and Estes 2015).

Accession Number:P07577
Protein Name:Small hydrophobic protein
Length:44
Molecular Weight:5108.00
Species:Parainfluenza virus 5 (strain W3) (PIV5) [11208]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Virion membrane1 / Single-pass type II membrane protein2
Substrate monovalent cations

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MLPDPEDPES KKATRRAGNL IICFLFIFFL FVTFIVPTLR HLLS