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1.A.11.2.12
Ammonium uptake transporter, Amt1 of 458 aas and 11 TMSs.  62% identical to Amt1 of Pyropia yezoensis (Rhodophyta) which is 483 aas long with 11 TMSs and is induced by nitrogen deficiency (Kakinuma et al. 2016).

Accession Number:R7QP87
Protein Name:Uncharacterized protein
Length:458
Molecular Weight:48338.00
Species:Chondrus crispus (Carrageen Irish moss) [2769]
Number of TMSs:10
Substrate NH4+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MDSTYFFADD GTLNATGLVT GFNELKQVVE DNVSGLDTMF VLVSGYMVFL MQCGFAMLTA 
61:	GSVRTKNTKN VLLKNILDAC VGAIAYYLFG WAFAYGGDSK INGFIGSGNF ALSASSEGDF 
121:	DDFTGFFFQW AFAATAATIV SGSVAERTSF YAYISYAFFL TAFVYPVVSH WVWGGGFLSN 
181:	IFGHGMIDFA GCSVVHMVGG FAGLAGAAIV GPRYGRFNAE GKPVPMPGHS ATLCTLGTFM 
241:	LWFGWYGFNP GSALGISGGA YTVVARCAVT TTIAAAAGGI TTLVLKKVMD HIFDLLAVLN 
301:	GILAGLVAIT ACCAFVEVWA AVIIGAIGAA FPIHGAVGFW GALCSGIFNS KTYQAAAGLP 
361:	DQQGGFVMDI SEWKLFASNL VGCIIIVCWV LVLIVPFFFA LNVMGLLRIS ESEELIGNDI 
421:	SKHGGPAYPN DPVGELEETN VSDSLAMDPD SSKHVDEV