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1.A.11.5.1
Trimeric ammonia channel protein, Amt-1 (391 aas)

Accession Number:O29285
Protein Name:Ammonium transporter aka Amt-1
Length:391
Molecular Weight:40992.00
Species:Archaeoglobus fulgidus [2234]
Number of TMSs:11
Location1 / Topology2 / Orientation3: Secreted1
Substrate ammonia

Cross database links:

HEGENOM: HBG677626
RefSeq: NP_069810.1   
Entrez Gene ID: 1484200   
Pfam: PF00909   
BioCyc: AFUL224325:AF_0977-MONOMER   
KEGG: afu:AF0977   

Gene Ontology

GO:0016020 C:membrane
GO:0008519 F:ammonium transmembrane transporter activity
GO:0055085 P:transmembrane transport

References (1)

[1] “The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus.”  Klenk H.-P.et.al.   9389475
Structure:
2B2F   2B2H   2B2I   2B2J     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSDGNVAWIL ASTALVMLMV PGVGFFYAGM VRRKNAVNMI ALSFISLIIT VLLWIFYGYS 
61:	VSFGNDISGI IGGLNYALLS GVKGEDLLFM MYQMMFAAVT IAILTSAIAE RAKVSSFILL 
121:	SALWLTFVYA PFAHWLWGGG WLAKLGALDF AGGMVVHISS GFAALAVAMT IGKRAGFEEY 
181:	SIEPHSIPLT LIGAALLWFG WFGFNGGSAL AANDVAINAV VVTNTSAAVA GFVWMVIGWI 
241:	KGKPGSLGIV SGAIAGLAAI TPAAGFVDVK GAIVIGLVAG IVCYLAMDFR IKKKIDESLD 
301:	AWAIHGIGGL WGSVAVGILA NPEVNGYAGL LFGNPQLLVS QLIAVASTTA YAFLVTLILA 
361:	KAVDAAVGLR VSSQEEYVGL DLSQHEEVAY T