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1.A.17.1.13
Ciliate CaClC homologue

Accession Number:A0CIB0
Protein Name:Chromosome undetermined scaffold_19, whole genome shotgun sequence.
Length:1371
Molecular Weight:160954.00
Species:Paramecium tetraurelia [5888]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Cl-

Cross database links:

RefSeq: XP_001437924.1   
Entrez Gene ID: 5023709   
Pfam: PF04547   
KEGG: ptm:GSPATT00007   

References (1)

[1] “Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia.”  Aury J.-M.et.al.   17086204

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MDDQNQPILQ EQPKPKQKKP LLNTKMVKKQ KMQNKKEENL REILNFYTNQ VDARKFLQKM 
61:	KAVVDSNQQE KKYQDDFLNP NEYNEMQDIY EDYNMGDLVI VFPNPDADGV KNPPITYKEA 
121:	EKFYDETLAQ KNDDVSESQL KKEKEAFLLA FLMLDDYQDD KTRKKMKEEE EKKKKEKEET 
181:	AKKENQDSVD NDSKSPHIDK SPHLEKSVSE MKMKKTQQLK PSPTPTQIKR EKQAASQHSQ 
241:	KEKPERQKFP SQHSQKENKG SNQEKSQTKQ RDMDMDLSDF DMDVEMEDSE LHEDNGDGQQ 
301:	KEEVQENEAD QENEGKKTKK ELNSYEKYLQ FMEKYKKIEQ EKLERFEKEE REAQNRKMKG 
361:	QAFKKVNQDK SVSENDISVN QIVQQKSQHG TGDDTQYMDP IKELFKINLT DAKQFTKVKK 
421:	QVNLGKYMEK VKDENTNEEI WMCNNSQPKD FMTLIRFTII EKLMRNAFLH CRQFISSNGA 
481:	QIFLVIKSTK QVVMRQAQKV KVVKQLELGF ADLFSLEPVD YKLRPLRLKK YLRSYQSNSE 
541:	EDQRIQARLI ELSNQTNKEE KIISLTNIST HCEQLYDKVV QWKPFDLRLN LILKQLEIDM 
601:	ILKPLAIDLN IDQSQEKAEI LNDEPISIQE WQSYFIYLEC ILCFGKQIQS IKRSSSEAKE 
661:	RLKEFEAFLY KLVFRKAISD ANELWFKKYK TIWKDISNNR FILFNIWDRL EIYPTAPYTE 
721:	FFIPQGEYGR QMWRKYEFNE KKQRSEFLNM EKIKLTHAIV LKHINIQKML QSQIALFYIP 
781:	IHDPYQLNGE PKNQLFQTLE DNEYINKRKN DQGQGDKKLD EVLVQLKAHA ESTDYDCKSV 
841:	KEDSAFNLRV PWHVPIQTYR DYFGEKVAIY FLFLTFYTKQ LWYLSVVGVI FQGLQSLATP 
901:	GLSDTLTVIF SSLIIIWSTF LIEYWRQEQV IFSLQYGQQN IEQVAAERPA FQGKFIRSIT 
961:	SDALNERFYS PFKRQITKLC AFGVSLLIIG MVVGCVIAIF IFKNKMIEED QSALLSQTLP 
1021:	GIMMSAQINI FTTVYANVAK IFNFLENHKI LQSFENSLVV KNFIFRFVNN FNSFFLVSFL 
1081:	SGFFPNLNIC KVNEEITNDC FLLLSNQLST IFSSNLTGSI PKLITPFVKE FSMKQIKNKL 
1141:	FVEKQNTHPF KYIDTQIEDQ LGLDPYQDDK EEVDGSVLDY LEISIQFSYL ILFGVSFPAC 
1201:	YIMAFGQNIL KIQVDKLRFL KFVRRPFPEG ASSIGNWLII LDIITFLGIF VNAGLIVFTS 
1261:	GFFTSNQELI FPVILVSFLV LKYIIRFVIP SYPESARILT ARQKCIIDKA VKGFSSQNSK 
1321:	PLTKTNFYSK IGNVSYENDI DELCVDEMEY LRNMRNVDGE HMDQDHVKEE I