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1.A.17.4.5
Transmembrane channel-like protein 7, TMC7

Accession Number:F4X8H9
Protein Name:Transmembrane channel-like protein 7
Length:703
Molecular Weight:81527.00
Species:Acromyrmex echinatior (Panamanian leafcutter ant) [103372]
Number of TMSs:9
Substrate Unknown

Cross database links:

Pfam: PF07810   

Gene Ontology

GO:0016021 C:integral to membrane

References (1)

[1] “The genome of the leaf-cutting ant Acromyrmex echinatior suggests key adaptations to advanced social life and fungus farming.”  Nygaard S.et.al.   21719571

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSGGERKKRG CDRGHGWEEA GAEFYQESYP AAMEADLQQA LQRDPSHIAT LLPSKKSRVA 
61:	TAKRIRNDTK TTLRRRTSTR SRSATKLRLQ GFEQLKWQRR KAWQQFRIRM KEAYSKMELW 
121:	NDSLKKIGGN FGMGIVAYFL FIKWLMYLNL LLFAIIYLLI VLPVIVLEVP ENETCSSNNV 
181:	ASVVCCSELY RNKTDENSSV SKVLSLLFYG SYTQKIYESV GTNFYYNSPL SYICTILTVF 
241:	IISLVAIVRS AAKSFRERIV EGEGQFYRYC NLVFGGWDYC INNERSASIK HKALYNEMKA 
301:	LLESERLEEE RRNRTPEEET KLFFTRLFVN LIILTVLGGC GLFVYYIIDF SFTQMSAHLA 
361:	KDHEILNLFF EFLPYICIVI LNVAVPFLFR YLVALEHYNP SYVVEVTLYR TMFFRFASLA 
421:	VLLTSLHALV AGKIPDNECS NKKTEQPLCW ETFVGQQFIK LYSTDIFIQF FMTFFINFPR 
481:	SLIARHTENK VLRFVGEQEF DLPKHVLDIF YSQTVCWLGC FFAPLLPMVA VIGTFLLFYI 
541:	KKFTCLVNST PSNKIYRASR SNCLFMFNLL ISFILAMIPV GYSIAKIMPS KSCGPFRGLE 
601:	TVWSFLSMTF SQFPNWLQST LSFLGTAAFG IPAFVILSLL LYYYYVMWLA NKHMVTVLKN 
661:	QLVLEGHDKQ FLLNRLSAFI KQQQDQNKFH QEQVNELGTF QHV