TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.17.5.15
Uncharacterized protein of 1548 aas and 12 TMSs.

Accession Number:B8C2G2
Protein Name:Uncharacterized protein
Length:1548
Molecular Weight:171399.00
Species:Thalassiosira pseudonana (Marine diatom) [35128]
Number of TMSs:12
Substrate Unknown

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MTTKRIVSTV ASTPLKISTK TIDITKQATR TSATMATKLV TGLDLNGFSA AQQKEREEEE 
61:	EEQRREYVQN SIGQPVYIGA SARKQRLSSD SMNGTTAVRS SHLGVDAGVP IPENAYDEFG 
121:	MNGNVTSDNE GDVDQEYDND KSDAFAHPQD RGNPFLGWIP WTLHLSYDRM LRGIPGTGTR 
181:	DGGMGGKLLG VNLDAIVLFR FHDLCLRVTA LATFVCVGII LPLNITSCTM EDPYCATLPA 
241:	NANLTNYGRT TIANVLYIAS EEAQATGFFT LDKKQYQIFT KFFWADQSLP HLIRLYIISV 
301:	CTWIITYYTL KNIKREWREN LVLRRVYYLE SDHYGNRQSE LDKTVFLPHA DDTDEEGSDD 
361:	DDGVDLRRRR AINRGLTKPK YKTRQPWIPH PEHRDTIPNI ELYSVLVGGL PSLPNEVVNS 
421:	EDMQTAIGIS KRASIDWQLA VATTFFDHCV PNQPGFSSSV VAVTILPGAP ELAKAWRKWY 
481:	AAAAALRRLR FIRQVINSKR HYDIDDVEVD EESQPSMNAT IPVDFHESQT PTLDMPQCKP 
541:	KVTFLDDDTA SQRFQDAETN RQVAEYRKTY GASHNPSDID YRIFRSLNYG PEQQAVYSRE 
601:	MAQGAAACCP NGCCEGRVRR QPIDRLMEME EATIDRLENA QYQLQCAQMQ AAVSIVDKGD 
661:	AKSKYQSTQD TEFMLQDAER MLSRSAHSPQ RTPSKSIYVG EGITKTPSSE GVELPSLDSV 
721:	FSGDGDDSMI DVAPKTPDFF SDDLSDHSGD GTPQPKQVIP GSSDKKLAME TELLSKFGPA 
781:	LPSFNQSAAK LSPMRDNVPD KSHITPETKA AALQTINEDA DGSHFVSPLR NGIASPTNSA 
841:	FLPPPSTRST TLRMTSEGKF LFNSATYDDE EMSMVSGLNN NTVAGGVVSE CDVHSSAGTS 
901:	LRKRALTGQS YRSEAEVSRS SNQWEQVNNI LRKDDEGQQE VSQSNREIET GVWTMPSCKS 
961:	SVSSVKSFFI GSLKAVGRWT KVKTDPLTSK LAKDSTYAVV TFSSRQAAVA ARHCLADGRG 
1021:	VHRWLSVETI PVPPLADAAP CDIITCRGCC RPVTLNLNQN QLMLRRYIAN VSLASIYVFY 
1081:	TIPITAAKQF VDPSSLSNTL PGFYNWLNSS KYLSADIVSG LVSALLYTTF FALCPVMFKM 
1141:	IANAGSQATS VQEAEKYALH YYWYFMLVTA FVFTGLADAA IDIWYHSNVE QSLEELFENI 
1201:	ASATPLTTSA TWLNWIIVRT TVNTFIFGCI GWRCCARCTM GGGPGGPIPY RIYIDCGVVF 
1261:	VCVVALAPQS PLVAPAALLY YIVCTPLWRR NCIFMYRPKF DSGGERWPFL SDVLITSLWM 
1321:	GQFLLTLQMA LRDAFGPALL AALPAIPTYL YRNHLIKRFR RAYDDAGLLQ TSLLDGWDNT 
1381:	IPTSTEKREE FRQFLVDAHK AAYIPVCIAG GATNILTAEP AVVIPSENDD MIGYSEMATS 
1441:	GRPEMPMNDI PMSPYFGDQA PVFQQASGVD VESMASPPVF NNNRGACMRR AMSFSNTPKS 
1501:	SAATNSNQFS EPMSPIANNN GTESMWQKVR DEVGSSSFQN EDPGCAQS