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1.A.23.4.1
The MscMJ mechanosensitive channel

Accession Number:Q58543
Protein Name:YB43 aka MscMJ aka MJ1143
Length:361
Molecular Weight:40683.00
Species:Methanococcus jannaschii   [2190]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate ions

Cross database links:

HEGENOM: HBG539016
RefSeq: NP_248135.1   
Entrez Gene ID: 1452039   
Pfam: PF00924   
KEGG: mja:MJ1143   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0055085 P:transmembrane transport

References (1)

[1] “Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.”  Bult C.J.et.al.   8688087

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MTITQMISEI LMHNTVYNYI LSLISIILFI VIGKYANALI ERLADKLHKK SGIELDELLI 
61:	RALSLPVAIA IILSGFYFGV NFLYLLPSLK TAVNEGILTA FILCVVVFFD RFLNELVERY 
121:	LALTISKKTK KDVDDQIVVL TKKLVRLVVW VVGLLLILSN LGYDIKTLLA GLGIGGLAVA 
181:	LASQNLVSNL IAGLIILTDK PFKIGNWITF SGGSGIVEDI GIRSTKIRAT DNSIIVVPNS 
241:	KLIDEIIQNV PSKNKWKVST TIGVTYNTPV EKIRKAEEII KNILLEHPNV EDEPITVYFK 
301:	EFGDWSLNIQ VVYYIKNSRY NGYQKYISTI NEVNLKIKEE FDRKGIEFAF PTYTLYLKRD 
361:	D