TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.23.4.6
Mechanosensitive channel, MscS

Accession Number:C4KE93
Protein Name:MscS Mechanosensitive ion channel
Length:309
Molecular Weight:34286.00
Species:Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) [426118]
Number of TMSs:5
Substrate ions

Cross database links:

Entrez Gene ID: 7940387   
Pfam: PF00924   
KEGG: sid:M164_2539   

Gene Ontology

GO:0016020 C:membrane
GO:0055085 P:transmembrane transport

References (1)

[1] “Biogeography of the Sulfolobus islandicus pan-genome.”  Reno M.L.et.al.   19435847

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MALNERRVIA IILTVILAGI AIGGGIFVLS SVFKIIPSYY LLYIYAGIWF IVAVIVSYFI 
61:	GSLIRNRLGN VIGYDNASSV SFVVRLIGYI IAFIGFFVLV RVSLGAALAA GGFAGLVLGL 
121:	ASQDVLSNIF GGIMLVISRP YKVGDRVTIS TWQYGLIAPT YPPKFFSNDF LIPGYTGTVT 
181:	DISLLYTTIF TDEQVPVKIP NSIMIQAAIF LHNREERRKV RTKYEVSKDI DHDVLINVLK 
241:	EKIKKLDFVI EEPSIKVLET TLNTYILAID TICKTIYEEP PRSEILKVVM RTVRELQAKT 
301:	ASSSGNNNR