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1.A.24.2.2
Invertebrate cordate Connexin 47 (White et al., 2004).

Accession Number:Q6U1M0
Protein Name:Gap junction protein
Length:399
Molecular Weight:47022.00
Species:Halocynthia pyriformis (sea peach) [247438]
Number of TMSs:4
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate small molecules

Cross database links:

Pfam: PF00029    PF10582   

Gene Ontology

GO:0005922 C:connexon complex
GO:0016021 C:integral to membrane
GO:0007154 P:cell communication

References (1)

[1] “Cloning and functional expression of invertebrate connexins from Halocynthia pyriformis.”  White T.W.et.al.   15527759

External Searches:

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  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAWHILHGLL EQVRVQSTFP GKLWIIVMFI FRIVVVARIG DNVYHDEQAN FVCNVLTPGC 
61:	ENVCFNRFSP ISQLRYWSLM ILVVSTPAIL FFLYATHIIY HAGIKYPSEE DEEKKEIMTT 
121:	RSDQSYIHPP SLKRRRDEGF LPNGTTGPLF EVKKIGNSDG KYKTAKFGNN RRSDDIRRRR 
181:	HVIRHDGDVK RKLSTDNNES NEEVYIDYRN KVPIFVDPHG QRVEFMKEVH RNRAEDDAMA 
241:	ERKFRKRMLE HPELYRAYWW HVFLRTLCEV GFLVGQYYLY GWSVHELYEC NYWPCPKTVD 
301:	CFVSRPQEKT CLLWLMYVLG IIACLLSVAE FWTLGITRLK YAFLCCSHDE SREERRRRLA 
361:	LLETHSTHHD KENDPLHPRL ITGAMSFDSL SSETTVESV