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1.A.24.2.3
Inverebrate cordate Connexin (Hervé et al., 2005).

Accession Number:E4YIP4
Protein Name:Gap junction protein
Length:326
Molecular Weight:37948.00
Species:Oikopleura dioica (Tunicate) [34765]
Number of TMSs:4
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate small molecules

Cross database links:

Pfam: PF00029    PF10582   

Gene Ontology

GO:0005922 C:connexon complex
GO:0016021 C:integral to membrane
GO:0007154 P:cell communication

References (1)

[1] “Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate.”  Denoeud F.et.al.   21097902

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAWHIIEKLL EEVAKHSTFV GKVWITAIFL FRIVVVTRIC DTVYHDEQAA FRCNIKQPGC 
61:	ENVCFNDFSP ISHVRFWGFQ IIAVALPSIL FIVYAAHEVG RKVSRPTGNQ KLGTIKGPIG 
121:	RIGSRLKTAH IFIEKPKNTK EYFKRFLKFL FAKKRAKRTL AQRKKSQVSE EGHESEIKQI 
181:	ELNLCRGYIF QSVVRCIVEI FFAFFQFRLF GFDVPEVVKC DLDPCPNSVD CYISRPKEKR 
241:	ILLVFMFCIC LLCILLNLLE IGTFISYRDD DDQKSNMKDF GVGDSAKQHK MYAKSFLHPE 
301:	DATNYQESDE EEYRRRIDLV HSDNYI