TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.36.2.1
OOC-3 protein, isoform B.  Required for establishment of cortical domains in C. elegans embryos (Basham and Rose 1999; Pichler et al. 2000).

Accession Number:Q8I132
Protein Name:Protein OOC-3, isoform b
Length:446
Molecular Weight:50743.00
Species:Caenorhabditis elegans [6239]
Number of TMSs:4
Substrate Unknown

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKIIWVTLLL LVPQLFATQD IDEEFTHENV WKDPNDPTSG ESPPASKRLL SVRNQVQKPD 
61:	QSLRLILRQL LHETKIDYHL EGSIKKDVQI KISRHSMSVL SKYLKNDEAD LAEEREAVRS 
121:	ALSNIFSVKP PAPDRTWQDT FVTLQPFIFT LNIFILPAAA FVVLRSIVRP RNFWILVLST 
181:	ALLVSMYSGY SKKYQEAESR RFAQFQEHAH DSCATEGLLS RMVEILASPF QYRQKSKCLK 
241:	YIESQTISIF HEISIIEVFS ETISGGFFAF FSGSAKHFNL FFRNLYDGAP LIAQIVMTIF 
301:	LVLMLGAIRT PFFSYEPIWL NFCSSSIGKI AGWLDGEPPQ QPAPQLLITA KEMKRLEQAR 
361:	NKKPEMISYP TSEREDVVSG SENGNEKKSD NEREESMKME EDSAPVESSL EDDLSLLGES 
421:	SEDEDEEKVN ESPAKIDSTT LSESSF