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1.A.4.1.11
TRP channel homologue, Trp1, of 766 aas and 6 - 9 TMSs.  Contains Ankyrin - PKD1 - TrpC channel domains.  Exhibits properties of mammalian signal transduction Trp channels (Arias-Darraz et al. 2015).

Accession Number:A8I051
Protein Name:Transient receptor potential ion channel protein
Length:766
Molecular Weight:84280.00
Species:Chlamydomonas reinhardtii [3055]
Number of TMSs:9
Substrate Ca2+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKVAPAPASG QPGGGSKKPS DYGCQLHYKH ARVVEPESTT DDGMKRLKDV GDKGTLITAA 
61:	ELGLVDKYRD LKRAGQDILT CDWPYHYSSI LYACYGNQYK ILQMVEREFV GSTQELTAMH 
121:	TTRCWVGKNS AMVAAYQGHL ETMLYIIDLD MQGKFTEDLF KQRDMMWAAS QGHTDTIEVL 
181:	LATSRGLRRP ASSQDALEAG VKHSDLVGKS AASTTAAAAA GGKTASGKPG EPGGGGAVKL 
241:	KDVHITVRTL QGVIVSAYRA GMNCMGVIMY CQSLLQQARY FDDLVAQLTA WEVKLLDTCR 
301:	NKQEVQAILA PTEDDPSEPV GYALATFDKA FLSHKFVQQI FTEKWDTMGV TDYTKSLFGV 
361:	VWGGCSLVVA FAAWATICPL VVVARSFLSP VQDFMMRGKV IVDSRFPWHV PLYRWLLTQC 
421:	ALITFTVLLS YLVFSFDPSD PVPASVAPLN TFLAVWCAAI LEYVEEGRAE YMSSGWNVMD 
481:	VTMALSYILH YILRIIAVRV TDNLNILLVV NDLLAAAALM AWFRMVSVFE LSSAIGPLIQ 
541:	MMKQALFQEA CIERDPTTNE CTKYTSWGYD WQKDGLVGGM TFLQYIALGN ANPVDFEQKR 
601:	VTGVIFYLIF AIVTAILLLN LFIAMLADTY TRVSTQAMVE FRYRKAKLMA SYSRRDFVCP 
661:	PFNLLHLVCA AVGNGLRRLV WGPDGFTPGE EMRQVVVLQR RVVDDFLNSN RVALFREKLN 
721:	AELPNLVHEM LKQKGKGDGG ALAGGGAAAS TTVLATAVSV TAAAGH