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1.A.4.10.3
TRP channel homologue of 1486 aas

Accession Number:D8TMS8
Protein Name:Putative uncharacterized protein
Length:1486
Molecular Weight:158034.00
Species:Volvox carteri (Green alga) [3067]
Number of TMSs:10
Substrate Ca2+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MERLKGGCMS LQAYLLLPIC LRTSCTLRVV WTRRTPSVRG WMWLHHKAAR RRSAILSSPH 
61:	KQAAACKQRA DAIRYGSFVA GINTAGQGIV IVQIDELILG SLETSHAFGH RVTFENVDPA 
121:	SLPHFITCRF AGVTSGQLTW DGVLDYTLAA RDGAALRRLI ESHYLDHLLK SQDTVDRVEK 
181:	VAIANNDPLL MVMLYDHTSI EMDLRVLAFL VHSWAVQPLS GRATAGAGSG GGGGGGGSSA 
241:	FGGTSTWDSA FSTRDDDLPD FFDGADPSVN LAARIEEFLV KYVLQRRNPL SATAAIIRAI 
301:	EVGRGLAGVV YADVRNIRLI ERILQPVELP NTVNEVSPLQ VAFDSCDLKF MTESLVELYV 
361:	KVQWLGGELL ALTSHEDPRS LGATNPLLAY GVLKSMGFAG KGTMDFLVMA ASRLWHMYVF 
421:	ASSAFFDSPR GRWSMHALSE LVFLGLYQWQ VMFPDMDVRH LQAVHLVFLA FIAGNLVDVA 
481:	QFVHFRYGSL ARIRRFMADP WNALGIVVNG GLAVLTVLKL TQDFGGLPPY KPADAIHMCM 
541:	ATLAVFVWVR ALGIAVPVYP SLGPLLNTVA RMMEELIAFL FPMLIVMTGF STMMTAVYKD 
601:	MIGEYGNFFQ SMLQLFSSIL GNFDFTAFEG LNRTQQLYGI VVLAIFLVIS AILLMNLLIA 
661:	IINNRYRPEE VEAETQFKKA QIVSYYQTQV RRNLVCSPFC LTQLALQAAP LLPSGRRNKL 
721:	SGAARGVWVL GLVPLDGMVL PDDGSDRPTG AAELPHLAFL LTLYPMMAVL CISLFLLYTP 
781:	FGVVQFASKM YSKSIKQYKR RMEQHSRRAA PQATSKAQLN VVQQKGAGRT TTTKTTTTTT 
841:	TTITQVGTAA EPSPSPPSPL RPPPQPATPA AAPATAADVE TGATAAAAAA APSPGVVVAR 
901:	SPSSGNDVVK QYQRLKKELQ AEANAAETGL IHFAGYLLAS VFLTVVGLVF YLVVMVLLVL 
961:	VGWASLYQWV AKVLFSCYNV GVRPFVDMAR ARRRRRRVSP AAAAAAALHV ASGIGAEAAT 
1021:	AGGGRGAVSV PAGCGTGALF GGGGGGGGGR SQKDSGAAAA DARADDVGGG VGGAGDVSEQ 
1081:	LYYKQSKARL HWRHAILKVI ALKNERYLTK RDVLKALAAS KFRLHMAGWD LRVDPRSSSQ 
1141:	DIIESQMQDL EDDDDPWDDD ELQQDADDDT LESTILEKTE ALTHMVKGGL SAQQAAMESL 
1201:	MQLVRELSEE VAALRAAPGV TAATEGTDGF GAAAAAALLS PPRPAPPPAT RPPSAWGLGA 
1261:	ELAVTEGSDV DDAVLLGSGV RQEPELPRPL SSSRSGDGDS YGGREVTSRR RDTGNAGGRV 
1321:	GSGGIGSSPP PRPPLPATAG RSVAATPPGA SRAPGSSSSP AASTHGSERR SSSASGGPPR 
1381:	GLDPQMPLER LLDSSGGPDA LLAAIGTERE RADAAAAGDT SAAKPNFSRT VLEPLRPTGH 
1441:	PVQPVEPPVV EGSPAAREAA PAAAPKAAAA AAPPPTTPSK QHQGAS