TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.4.3.4
TRP channel homologue of 1240 aas

Accession Number:D8LH97
Protein Name:Ankyrin Repeat Transient Receptor Potential Channel
Length:1240
Molecular Weight:138168.00
Species:Ectocarpus siliculosus (Brown alga) [2880]
Number of TMSs:6
Substrate Ca2+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MARCTLICAA LDKATSDADM ADAAMPEVHQ QSWTPHRAQN LLGEDLESVL DGALQSKAPE 
61:	DGQNLLTYAA AQGRDAWFLF IAGKIRSKMG VRALAKELRE LDIDRAPLLF NAAASRGEKS 
121:	CFRTAHDLVY KALGKGGLLE QLGAVDGEGR TMLMHAARSN NSDAYDEIVG IYFKVVPLTS 
181:	SGYTEKDHKG MNCLHHAAEA GCSEVLGKVI KKYSDAGGSS YAERDNNNRT PVMCVLSDAS 
241:	REERADDSLR DKFTLLYSNM STTCGEQDEK VCTHDGGHAK QGWMEMTDVP TQQISRSEEI 
301:	SKARGVTELM HAARGGLVSL ELALNEPLPS SRLEDGSISL DGALNVEACD EPASDEPRWE 
361:	PQPAWGKGLL LAAAAERGDI DVLHVVLTAI KDNKFTKEPN TDRFTLRKQE SRLAELPYGD 
421:	GEKVRTVVRE MSKGGKSLFS EAILSGQTVA VKHVYRLIVK LFGKTHPETW AILTGRDFNS 
481:	GKVAEASPLA CAASASMEPC DHGRDTFDLV YSYLQTHAPD EKKLRIQLVP QPPPLDLTAK 
541:	TQISPLVGAA FSSNWILFWR VYDTYTTLAK KPWLRTNALR RATSDKSGGE ELMSWREYLR 
601:	AYSSRAVHVA SERGAFTDLR DLVKEGFPLH DDHIPALLVS IGDHEQDIIE TVLFAVANAS 
661:	NPFGMAAGVS RFLRRARVDH PMHQRGLRRL QTRIDRFTLE QWMLEPSLLV EKINKAKKYR 
721:	GPVYKDPLQS ALDRGSDALE FLFSPLVLDY VHVKFAGTLP HWSSRNPFQP TINEGLYKYD 
781:	NFEVYDLAKL LRGSKNDQAT GRTAPSGASS ASTGSTNRGS FLWRSPGSIM SFLLRFLQGW 
841:	DHPRSNDQSV WSIPHLTILP GLQFSLAGIL GKPETFFKVP VIRFVYEIFS YLVMLVLFCS 
901:	SVLLKEPDFI PRDEVIFYIF AAGLLWREVL EFLDGVPTRR HRTSGGPRTE EGGRVEPGIS 
961:	HLGAGSNFNR MVSAFTRYVF YDTWNFMDTS TICCIFVAFI FRMIARFDSE FDLFYAQFFY 
1021:	ALSAPLLFSR LLVLSQIDAT LGPMTQVIWR MMSHMLRFSA FIAMVMLSFA LAFHAVFHTC 
1081:	GEHSEPQCTL DDDDAFPLRD AFGTFGDSLL TVFSSALGGP EFDLFDDAGS DCRCNLPRGA 
1141:	RSAGISMMVV YTITMSVVLL NLLIAVLSTA HDEVYVNAEK EFHLARARLV VQSARSVAHR 
1201:	RPPPPLNLVK LGFGVLIDVF TEIWRFILWA RSLRSRCLDW