TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.56.1.11
Vacuolar/tonoplast copper transporter 5 (AtCOPT5).  It exports copper from the vacuole to the cytoplasm and is required for photosynthetic electron transport under comditions of copper deficiency.  It also promotes interorgan allocation of copper (Garcia-Molina et al. 2011; Klaumann et al. 2011Klaumann et al. 2011).

Accession Number:Q93VM8
Protein Name:Copper transporter 5
Length:146
Molecular Weight:15784.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:2
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Cu+

Cross database links:

Genevestigator: Q93VM8 Q93VM8
eggNOG: NOG313752 NOG313752
HEGENOM: HOG000195393 HOG000195393
Entrez Gene ID: 832188    832188   
Pfam: PF04145    PF04145   
KEGG: ath:AT5G20650    ath:AT5G20650   

Gene Ontology

GO:0005794 C:Golgi apparatus
GO:0016021 C:integral to membrane
GO:0005770 C:late endosome
GO:0009506 C:plasmodesma
GO:0005774 C:vacuolar membrane
GO:0015089 F:high affinity copper ion transmembrane transporter activity
GO:0015680 P:intracellular copper ion transport
GO:0009737 P:response to abscisic acid stimulus
GO:0005794 C:Golgi apparatus
GO:0016021 C:integral to membrane
GO:0005770 C:late endosome
GO:0009506 C:plasmodesma
GO:0005774 C:vacuolar membrane
GO:0015089 F:high affinity copper ion transmembrane transporter activity
GO:0015680 P:intracellular copper ion transport
GO:0009737 P:response to abscisic acid stimulus

References (6)

[1] “Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.”  Tabata S.et.al.   11130714
[2] “Empirical analysis of transcriptional activity in the Arabidopsis genome.”  Yamada K.et.al.   14593172
[3] “Identification of a copper transporter family in Arabidopsis thaliana.”  Sancenon V.et.al.   12650623
[4] “Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.”  Tabata S.et.al.   11130714
[5] “Empirical analysis of transcriptional activity in the Arabidopsis genome.”  Yamada K.et.al.   14593172
[6] “Identification of a copper transporter family in Arabidopsis thaliana.”  Sancenon V.et.al.   12650623

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MMHMTFYWGI KATILFDFWK TDSWLSYILT LIACFVFSAF YQYLENRRIQ FKSLSSSRRA 
61:	PPPPRSSSGV SAPLIPKSGT RSAAKAASVL LFGVNAAIGY LLMLAAMSFN GGVFIAIVVG 
121:	LTAGYAVFRS DDGGADTATD DPCPCA