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1.A.56.1.12
Putative copper transporter 5.2 (OsCOPT5.2)

Accession Number:Q6Z0Q9
Protein Name:Putative copper transporter 5.2
Length:176
Molecular Weight:17834.00
Species:Oryza sativa subsp. japonica (Rice) [39947]
Number of TMSs:3
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Cu+

Cross database links:

eggNOG: NOG313752
HEGENOM: HOG000195393
Pfam: PF04145   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005375 F:copper ion transmembrane transporter activity

References (1)

[1] “The map-based sequence of the rice genome.”  International rice genome sequencing project (IRGSP)et.al.   16100779

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MMHMSFYWGT SVTILFDGWR TSGWPGYLAS LLALFLAAAL YQHLEARRVR LRAGRRHRAG 
61:	GGGGAASSAA GPVVPAASDA RALLSAAGGR LGLGLGLGRR WMKEPRAAAS AAAAALFGLS 
121:	AAVGYLLMLA VMSFNGGVFL AVVAGLAAGH LAFRGGADEA DGGVGDDELE SPCACA