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1.A.57.1.3
The NS3 protein of 230aas and 3 N-terminal TMSs as well as 3 potential C-terminal TMSs of low hydrophobicity.

Accession Number:E0ZN37
Protein Name:Putative uncharacterized protein NS3
Length:230
Molecular Weight:25360.00
Species:Bat coronavirus HKU9-5-1 [875614]
Number of TMSs:6
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MNLYRLVADA LYATPAILTV DIQPTAEVVH GVKDYVHLTM TVALILYATV TLILWFLGGS 
61:	KYPYLRVLSH IALCLLQAGV LVWLSFSSNK IISICAQGIV VVCAFICVFE RLAMAIKLRS 
121:	LAPFTTTADY FAIVKTTCDT FVFPVDSSVE NLVVLTTSRG FYCNGNHIAG SIAVSDSVTI 
181:	VSLFNKHLLL LDRVEHGYDY TVFIYVNSVI LENTHPKVGV SNPEFDNVEL