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1.A.63.1.1
The α-helical pore-forming outer membrane nanomeric porin, Imp1227

Accession Number:A8ABZ0
Protein Name:Imp1227
Length:85
Molecular Weight:8388.00
Species:Ignicoccus hospitalis KIN4/I [453591]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate small molecules

Cross database links:

RefSeq: YP_001435849.1   
Entrez Gene ID: 5562471   
KEGG: iho:Igni_1266   

References (1)

[1] “A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans.”  Podar M.et.al.   19000309

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MEAREVEEMR RSRLLTLGGI GYTAVIALAA LVLVMGALGL VLKVAAAAGA LPSEVAKVAN 
61:	ALPGLKASVD ANPAAGSLSS VSVST