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1.A.65.1.3
Envelope small membrane viroporin protein of 82 aas and 1 TMS, protein E or sM.  Viroporin inhibitors have been identified (Takano et al. 2015).

Accession Number:Q52PA5
Protein Name:Envelope small membrane protein
Length:82
Molecular Weight:9370.00
Species:Feline coronavirus (strain FIPV WSU-79/1146) (FCoV) [33734]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Virion membrane1 / Single-pass type III membrane protein2
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MTFPRAFTII DDHGMVVSVF FWLLLIIILI LFSIALLNVI KLCMVCCNLG KTIIVLPARH 
61:	AYDAYKTFMQ TKAYNPDEAF LV