TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.73.1.2
The colicin A lysis protein, Cal

Accession Number:P06962
Protein Name:Cal
Length:51
Molecular Weight:5088.00
Species:Citrobacter freundii [546]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell outer membrane1 / Lipid-anchor2
Substrate Colicin A

Cross database links:

Pfam: PF02402   

Gene Ontology

GO:0009279 C:cell outer membrane
GO:0005886 C:plasma membrane
GO:0019835 P:cytolysis
GO:0009405 P:pathogenesis

References (4)

[1] “Lysis protein encoded by plasmid ColA-CA31. Gene sequence and export.”  Cavard D.et.al.   3889552
[2] “The complete nucleotide sequence of the colicinogenic plasmid ColA. High extent of homology with ColE1.”  Morlon J.et.al.   2832701
[3] “Lysis protein encoded by plasmid ColA-CA31. Gene sequence and export.”  Cavard D.et.al.   3889552
[4] “The complete nucleotide sequence of the colicinogenic plasmid ColA. High extent of homology with ColE1.”  Morlon J.et.al.   2832701

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKKIIICVIL LAIMLLAACQ VNNVRDTGGG SVSPSSIVTG VSMGSDGVGN P