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1.A.75.1.5
Hypothetical protein, HP (2544 aas; >40 TMSs)

Accession Number:A0EF36
Protein Name:Chromosome undetermined scaffold_92, whole genome shotgun sequence
Length:2544
Molecular Weight:303937.00
Species:Paramecium tetraurelia [5888]
Number of TMSs:41
Substrate Unknown

Cross database links:

Entrez Gene ID: 5047085   
Pfam: PF12166   
KEGG: ptm:GSPATT00026   

References (1)

[1] “Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia.”  Aury J.-M.et.al.   17086204

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MVPFIVLLPF VDKQERKQRV IVSWYKVSYL SIINWIFYCI FTYYLGYKFF SEEILKQFKL 
61:	IMKCHLIISL TISVYFVIGL FLSLLNSEIQ LVMIERLNFN SEIYIFGYES VFALMLCQLL 
121:	LYLAMVVFLL FIYWNAQMPQ YEYVEQNENY TFQQRKTSYL RQQSIMDKII MLIIVQLCLN 
181:	DGLITLFLVL CMLVWLAIHF HILNKRSRFR YCQIVIKSII VCSFVALLML ILSGQQNYSF 
241:	STLNGTLNIY RIFRIFGILI MTTILILSMR AYHYQMIIGD EEEIEDLEKE IQKDMRLKIS 
301:	SLEILLGENY FGVIMILSVF WISKQFSILR GLVYLILLVG QLKRKHYKAT RRWQCAIAIL 
361:	YLAFVQFFLL KFAYFQYLGV YEQPQFNPNE LFAIWNYFYN RFNIIMIDLF YILIVSWLVY 
421:	SQQTIDDRRR QKKINDLDSK DRPNREQKQS CWSNFKSNLS SFSYQIQKSF LIHFDEIVII 
481:	YSLITALSHA DIFRGVFLIF FILYAFAQLE KRRKFMRNHL SIGYIILFIL YSMQLMFLGS 
541:	LQTLNFIFKF GGLDEVTQQF KFSFYFIYKY YDIIIGCVLL TFQIQVIQKS DHYQEYKKKL 
601:	NDYNLDYLRQ ILQTNGLIFC QIIALIVAFI PPANLLSLIF IFFFQLFLYL YYIHGQLNII 
661:	MDRLYQYWPL MITLTLIILI VRYTYTIKFF YYFVELYFQQ PTLLSDFGLD PNFNTLKLAG 
721:	TGIALLVLCA YKRAYLAPLI EQQKQQKQIY KKGTLAYYIY CIHIKLCVYS VYHIQKVTFM 
781:	FSFFISVYQQ SYIGFLFGIM IFLIMLNEMN NNWQNTSIPF LVIIFVQILI QYIFQAELLR 
841:	NAQGQETISW IGIENQYQNK YWYLLIMFHL SEMLQVLNVM FKQQVNDYLQ LFLISTDREI 
901:	SNLNLLQQLL HSLQENIIQE QNSVESDASQ QQQIELQARD ENSQESIFYD ELDEQNERFA 
961:	KIQSYYILKS SMQQEQFYYR VYPFYRALKF HQSVDNLFTQ IGLEVCLFFI VITAYYQRNF 
1021:	FSVFYIVVAS AFANKSHLLD RHQKLGIFGQ AWGALCILQM LEVIRKYATL QWTPPSWDVR 
1081:	KPWWYFSYSC DPRGKESFNN DDPDDSTSDF MKCQTDWNYW LSLQGYTNWD LWINFIALLI 
1141:	SLCYYRHFKT VQRRQQEQEI QDHLHPEVEQ IQANVMDKND FTYEENRTKI TDFIKFFIFC 
1201:	YFYKFALIIF LLIGMSSDIQ SYTEVISCIY FFLAINLLYM SEKLEKDRNI IWGKLILFNT 
1261:	IVMIAMSLYQ APFIKCPIIY ENDRYYYDNV ECVQIQLNNH YYNSDFFIFL QDEFQLLAKQ 
1321:	TNDVFKKYEG VSTLDVIYMF LSHLLGLNKT LDFRFGFCKE TLMAFFFLLG LLQRNIWAHP 
1381:	YMKQYVDPYL NRRQVQLQLV EGIHLKRIWD FKYVQAQKQV HESLQQRVQN RVEKWDNFFQ 
1441:	FDDNKSLKKK SFFYLTPRRE EQFQIIQFTE ERSEDNQQHT SFDSEKFQGF KGEPKKLIKA 
1501:	ERITQQNKAP VIHLYDACCI VKNSINKKDL RLRLKKLMLL EEKRQLEKVY LNDRIGLTNY 
1561:	HVGVIDEIDR KIIQVDNEIA QLFKVQQLRK SISMRDIKMI PFEEYKEDRK SFEMLSERDE 
1621:	RLQQISEEES AKDFKKPEEE QSDDENSIVQ PQKSFSEKLK DLIIYILTHD TYIREQEQQQ 
1681:	NEIDKKKLSV LIFVFVAHYF QVVCVLLMVV NACFNANIIA LFYPFSAFLY GLLENPVPSR 
1741:	RYWNFLLIYT IIIISLKFIY QMPIFCDSPP YRFIGFSQEE ACEPRVTTQQ EKITRIDYVI 
1801:	GIRKYQGAET FMNAIWIELL LFIAFLIQRY LLQSQGIWDY MKLSLDQYFI PQFQQQVEDQ 
1861:	LSEHKQESSS KESEQESDDF SENHQVQEQQ KEQQTVMISI QDTCTSVWQQ IVKYYYRLFP 
1921:	HALSTIYIQR KYDPATKQMI IKDGVVLPEQ IKVGRDFYAP GFIICLIILV YFLLFYPNII 
1981:	AKRSYAHITQ GQSQRFSSEV IFVLLVVIAI IITDRALFIM RKVTKDPRND KQNQSGNDIQ 
2041:	KYTLMIKVAI HFILIIVVHY YFFFVIPQKT NKRFQESYYL IFAYILVCIY FMISSVQIRY 
2101:	GYPIQKYTQI FTNSHKPANS MAFKIYRMIP FLYELRVIID WTFTTTALDL IQWFRLEDIF 
2161:	ANLYICQAYQ DSRIENHKLG DPRSSSDKCL NGCLYSMFIV FIIILPILIF STLNPAVEIN 
2221:	NITNGKFSIK AAFFGSDDKL FFTLFQVNDL ELLDIPNEQF KKIQKIYGEI ETSWQERMQK 
2281:	VRIKRFSDLE WNLPENYRDQ IRNMIKSQQY QVEIQCEWVF QKSDSQGGAK SFTGQSIVQA 
2341:	PDTFVNNFGK ILAPRAPDAV FDIRELVPKF LYVGESAETQ ALRLEPVNIR EEISYYQDIR 
2401:	LIHKKTSDFV FFELVPNDDS TDLKQIGASS QNRVEFFVLN ELAFGSLIGA LSTNMSIISI 
2461:	YATFVLTIGR FLRFAYDKIS TRVMFEEMPE TYELFDLCQS IYIARVDGDF IKEEIFYELL 
2521:	IRIYRSPEIL FKMTGASIYD RQKK