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1.A.79.1.4
SidT2 dsRNA uptake channel

Accession Number:D6MZ58
Protein Name:Systemic RNAi deficient-1
Length:856
Molecular Weight:96738.00
Species:Siniperca chuatsi (Chinese perch) [119488]
Number of TMSs:11
Substrate dsRNA

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MVLRSCWKSR HKNSSGLAPR WIRSGLAALL WLCVTQFACG SGAVGETKNV VQKDAEFDVT 
61:	YNDTVTSENQ TIYAFNHTVS RNKTEGVHVS VDVLSQGLES PILFVVRQKQ VVLSFQVPLI 
121:	LRGLYQRKYP YNHVGRTLCQ PPTRAASETQ YFFVDVSTLS SQGTNYQLRI NRLESFTLQT 
181:	DKKFSFTASP SQPQYSKYVF PDGMDTVIVK VNSDMNFPCS VMSIQDIQCP VYDLDNNVAF 
241:	IGMYQTMTKK GAITVQRKDF PSNSFYVVVV VKTEDEACGG PLRFYPLRPD ELIDAGNRSK 
301:	VLDVIVSPAI NSQVYVMGML FCLGIFLSFY LLTLLVACLE NKRMTKKREV FENPADMSPA 
361:	ETASLLGKNG DGKTPASAYE YGSFADNGST LSSEAITDSA TSTDNNYGYL ERPLESVGRS 
421:	RQESLSSVEE DDYDTLDDIN SDKNIVRTKK FLYVSDLSRK DKRVLSKKYQ IYFWNIATIA 
481:	VFYALPVVQL VITYQTVVNV TGNQDICFYN FMCAHPLGAL SAFNNILSNL GYVMLGLLFL 
541:	LIVLRRDIVH NRALVRNDLN ALECGIPKHF GLYYAMGTAL MMEGLLSACY HVCPNYTNFQ 
601:	FDTSFMYMIA GLCMLKLYQK RHPPDINASA YTAYACLAAV IFFSVLGVVF GKGNAVFWIV 
661:	FSVIHILATL LLSTQLYYMG RWRLDSGVLR RMVYIIYTDS IRQCSGPMYI DRMVLLIMGN 
721:	IVNWSLAAYG LIERPNDFAS YLLAIAICNL LPYFAFYIIM KLRSGERIQC LALVCILFTA 
781:	VVWGFALYFF FQGLSTWQKT PAESREHNRD CILLSFFGDH DIWHFLSSIA MFGSFLVLLT 
841:	MDDDLDTVQR DKIFVF