TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.79.1.7
Insect Sid-1 of 766 aas (Xu and Han 2008).

Accession Number:A5HJ42
Protein Name:SID1-like protein
Length:766
Molecular Weight:88304.00
Species:Aphis gossypii (Cotton aphid) [80765]
Number of TMSs:11
Substrate dsRNA

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MWKPIFVVIF GLSSVWSELF SENVERYGSN DPIPIVLKGN YSQNYPQIIN NTMSYLFLFD 
61:	YLPNSTFEPP RVKVTLIEPE DNSIVDPLIV VVRHRSGVIS WQLPYIEKQQ EIKYYKAAHI 
121:	LCPLLSASNN ESRIVVSVST NSLSNITFIL RLDIQKSFNV LLNQEVSFNL SPSEPVYYYY 
181:	SFKQNSSMVL LHVKSDDSIC MTLSIQNSSC PVFDSLETVQ YDGLRQTVSK TGGIIISKDE 
241:	YPLGLFIVFV VHSDDSACHQ GNYQAINSRT KSINFVVKPT VDFNYQIINC LIVIVIFIFI 
301:	LVFTTFFYHT KGDDLKTIDI IQEEPSTSIC STPVNIQPDN VNYDSSLDET DIDILKSPEP 
361:	WKDLIRTKAC LYVSDLSKKD HRILKAKSRL YVWNLITVAV FYSLPVTQLV FTSQKMLIET 
421:	GNQDLCYYNF LCSHSFILGP WKFSDFNHIF SNIGYIFFGL LFILITYKRE CVNIPNKKFG 
481:	IPNHYGLYYA MGSALAMEGL MSACYHVCPN HSNFQFDTSF MYVICMLSMI KIYQTRHPDI 
541:	NANAYLVFGV LALVIILGLT GIMYEGPILF VLFTCLHLIM IFWLSAQIYY MGRWKLDKKT 
601:	PKRFLNHIMT APNPCRPKYP NRMVLLSFGI LINLGLAVSH WMIKFGNFGN YLLILFMVNL 
661:	ILYLSFHIVM KLISKEKLHF WPLLYILLAM IFWSASLYFY VHKSSSWTLS AAESRTYNTP 
721:	CTFMDFYDNH DIWHFLSAIS LFLSFMVLFT LDDDVNSKPT ATIPVF