TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.23.1.18
Putative porin of 470 aas in the outer membrane of an atypical firmicute

Accession Number:G0VM40
Protein Name:Porin
Length:470
Molecular Weight:52846.00
Species:Megasphaera elsdenii DSM 20460 [1064535]
Number of TMSs:1
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MMEFNKKGFA VLLALSLGMS GAALAASADS FSDVPKDHWS YEALDYLAKE GVIEGMGNST 
61:	FEGGRTMTRY EVASIVAKAM QKGGGNFGDK TVLEKLHAEY ADEINVLQQQ VAKNTKQIEQ 
121:	NTKDIDSLKN GIAGKMELSG FIRVQYDHDK YSNNVQNNSD LYKDNDRFYM SLNGSYKVND 
181:	NWKAKFQLEK NSFYNGGHDH ENESGSWATD GKDKGRAKRW SGHDGDIQRI WVEGTDPKTG 
241:	AWINIGRAWR GLGQQNVLFG TESDGFQLGV PIKGTSLTAS GFWFASTGAG NHESWYGLGT 
301:	WGNIGPRAGI NVAYALNSKH KGDVYEKNTS HLESWGEETV DYDKAYVLSG WFDLSKKVRF 
361:	LADYVQTNAD YQDNSTFLRL NYGNTDLQKP GTWQAYARWY RYGTNGTIAG DDEWSSLFYN 
421:	GSAGSKGWIL GYKYVPWKNI EWETLYSKQE QISNSDNKRT LVRTQMDFHF