TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.23.1.9
Putative outer membrane porin

Accession Number:G6FN26
Protein Name:Carbohydrate-selective porin OprB
Length:541
Molecular Weight:58116.00
Species:Fischerella sp. JSC-11 [741277]
Number of TMSs:1
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MTKPLWNALK LSPLLFAATL FAANNAFAAE VKQEINQDVT SVAQLSQGSA DSIGQVTSVS 
61:	QFSDVQPTDW AFQALQSLVE RYGCIAGYPN GTYRGNRPMT RYEFAAGLNA CLDRVNELIA 
121:	TATAELVTKE DLATLQRLQE EFSAELATLR GRVDALEART AELEANQFST TTKLVGEAIF 
181:	NLGAPFGNER ANGTGTDIDD NITFSDRVRL SLNSSFTGSD QLQIRLQAGN VPNFGSATGT 
241:	NMARLSFDNN TGNDVEIDKI NYAFNLSDAI RVKVDANNGE FWENIPNFSE FASSGRGAIS 
301:	RYGRFSPIYR QGSGGAGITV SFRPKGSAFN AAIGYLAGGS NNVASDPASG AGLFDGNFAA 
361:	LAQVGFQPTG AFNVGLTYAR SYQNNVGGVN LFSSTGSSNA SQPFGNVRTS ANHYGAQVNF 
421:	KPSSKLTVGG WVGFSNAEAR SGANRGDNAD IFYWMANVAF KDFGKEGNLL GLQFGQPPKV 
481:	TDNDIGARED NDTSYHLEAL YRYQLTDNIS ITPGFLAIFN PEHNDNNDTV YVGTLRTTFT 
541:	F