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1.B.24.1.2
MspA porin (233aas; one N-terminal alpha-helical TMS).  This protein is almost identical to a cholate-transporting porin in R. jostii (RjpA; porin A) that is involved in cholate uptake (Somalinga and Mohn 2013).

Accession Number:C1B943
Protein Name:Putative porin MspA
Length:233
Molecular Weight:23889.00
Species:Rhodococcus opacus (strain B4) [632772]
Number of TMSs:1
Substrate Cholate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MTDISTSRFG YKRFTRTVAV AGIAALAMVM GNGSASAGVD NSSSVIDARG NRIEVVQGDT 
61:	QYQTVPPLDG VPTSVEFFHN GYAGVAITGP NAEEFEGTQL TVGYQIGYPV ALAGATIVLN 
121:	TPGLGFAIGS SNGIDLGLLP ELSLGLNAGT NVELAGDIIP SQELDIDLEP GGITTVPILE 
181:	GQEFDGSAAV VRMQGVHGSI SGAIGPVTIR PYAMAVTENG DTVMTYGVPQ KLN