TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.B.25.1.23
Outer membrane porin, OprD family

Accession Number:G8QGV5
Protein Name:Outer membrane porin, OprD family
Length:440
Molecular Weight:48623.00
Species:Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) [640081]
Substrate small molecules

Cross database links:

Entrez Gene ID: 11545867   
Pfam: PF03573   
KEGG: dsu:Dsui_2952   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0015288 F:porin activity

References (1)

[1] “Complete genome sequence of the anaerobic perchlorate-reducing bacterium Azospira suillum strain PS.”  Byrne-Bailey K.G.et.al.   22535943

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MGRCLRLLGL ACLLGTSVQG RAGDDGAEAL AGTTFFGYGK AMYVFDDKKG GRPNQNTAGF 
61:	GGKLGLESGD YRGWRLRAAW YTTQDLGLAR DNPRQTDAYM FGLDKRPYSL WGEAQLIYSR 
121:	GRSRLTLGRQ EIQSPLINSY EYRIIPNLFD AYVLSSRELP GTTLTLGYVG QMSGLDGLVS 
181:	FSDFRSMSQQ TYTSLLVDGR GRPDARNGET LDPSTVVGHR GVWMTGVAYE AEHKLQLWHY 
241:	YGRDTLQTVY ADGRFKQPLG RGFTALIDGQ AYRVSEVGAF RDYLARHGLN ASYGLAGLKG 
301:	TLAHAPSGLS LALMANRFGG DQRTVTAYGN WGGYPEFVLM PYLYAENDAM SAIARSRLRK 
361:	ATLLLDLGPY GLPEHSLLLG HARMDIDEAI LPGADIIANS LIYRARLTPR VSARLHLEAR 
421:	SSAHSRYDNH FLTLGLRYDF