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1.B.25.1.9
OpdP glycine-glutamate-selective porin (Tamber et al., 2006)

Accession Number:Q9HVS0
Protein Name:OpdP aka PA4501
Length:484
Molecular Weight:53032.00
Species:Pseudomonas aeruginosa [287]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Glycine-glutamate

Cross database links:

HEGENOM: HBG637898
RefSeq: NP_253191.1   
Entrez Gene ID: 881095   
Pfam: PF03573   
BioCyc: PAER208964:PA4501-MONOMER   
KEGG: pae:PA4501   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0015288 F:porin activity
GO:0006810 P:transport

References (1)

[1] “Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen.”  Stover C.K.et.al.   10984043
Structure:
3SYB     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MMRNQRVTSA TLGLALLAAS APGWAADEQE NPPAPDNPSY AAEVQSIPSV AKPIKGQAGA 
61:	TGLVEGQSLT LTTRNFYSRE NMKDSFTFRI PKAGGGSQRI HQRNAWVQGT VLKYSSGYTQ 
121:	GTVGFGFDVA AFNEIALERG KGRIGGGGNR TLANSDGEAL GEWSKLGVAN IRLRASNTEF 
181:	KAGRFLVNTP VFSYIDNRAL PSSFTGFAVT SEELDNLSLQ AGSFRKVSPR TGSGDEDMTT 
241:	EYGTRQVKGD RLNYLGGNYK PLDGLEISLY GSHFQDVWNQ YYLGVTHDIG DLENGIALRT 
301:	AFNGYHTGDT GAREAGYIDN DTWSLAFTLG HRAHALTLAY QQVDGNEYFD YVHETSAIFL 
361:	ANSMLADYNS PNEKSAQIRY ETDWSYYGVP GLSTGVWYVK GWDIDGTHYD GDRNGAYGNY 
421:	AEVRAQDGEK HHELGLMAAY KVQNGPIKDS TFKLTYMMHK ASQNQIDGSV NELRLVSTFP 
481:	FNLL