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1.B.26.1.1
Cyclodextrin (high affinity)/linear malto-oligosaccharide (low affinity) porin, CymA (Orlik et al. 2003).  Electroosmosis influences the transport efficiency of cyclodextrins through the CymA pore (Bhamidimarri et al. 2016).

Accession Number:Q48391
Protein Name:CymA
Length:346
Molecular Weight:40246.00
Species:Klebsiella oxytoca [571]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Cell outer membrane1 / Multi-pass membrane protein2
Substrate Cycloedextrin, Maltooligosaccharides

Cross database links:

References (1)

[1] “Genetics of a novel starch utilisation pathway present in Klebsiella oxytoca.”  Fiedler G.et.al.   8594196
Structure:
4D51   4D5B   4D5D   4V3G   4V3H     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKKKLLSASI ALALTAPVHS FAASDQRGYK PEDVAFDESF FSFGGHVGTS VEYEDKVTRG 
61:	FNNTDKKEKT ITNEVFNFFY NNPQWNFMGF YSFKIENREQ KEPGYYENED GIKQLFSLNK 
121:	GHDLGNGWAT GLIYELEYTR SKVYSPDVSG LRKNLAEHSI RPYLTYWNND YNMGFYSNLE 
181:	YLLSKEDRNA WGKRQEQGYS ALFKPYKRFG NWEVGVEFYY QIKTNDEKQP DGTINEKSDF 
241:	NERYIEPIVQ YSFDDAGTLY TRVRVGKNET KNTDRSGGGN AGINYFKDIR KATVGYEQSI 
301:	GESWVAKAEY EYANEVEKKS RLSGWEARNK SELTQHTFYA QALYRF