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1.B.27.1.5
Outer membrane porin/adhesin, BabA (HopZ) (Peck et al. 1999).  Exhibits phase variation (Kennemann et al. 2012).

Accession Number:E6NML3
Protein Name:Outer membrane protein BabA
Length:717
Molecular Weight:77932.00
Species:Helicobacter pylori (strain F32) [102608]
Number of TMSs:2
Substrate small molecules

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MKKTLLLSLS LASSLLNAED NGFFISAGYQ IGEAAQMVKN TGELKRLSDT YENLSNLLNN 
61:	FNNLNQAVTN ANSPSAINAA IDNLKANTQG LLNEKTNSPA YQAVSLALNA TVGLWNVIGY 
121:	AIMCGNGNGT GGGPGSVIFN NQPGSNSTSI TCNRFEPTGH GKSMSIDEFK KLNEAYQIIQ 
181:	QALMKGNGFP VLDKNGTQVN VTYTYECKQK NDNINGGVEQ FCQAKNSSGS SSSSGSSSTT 
241:	TQDGVTITTT YTNNKATVKF NTTNSAQELL AQAANIMNVL NTQCPLVRST HDENAPGNGS 
301:	PWHISQNGNA CQIFSAEFSA VTSMIKNAQE IVAQAQILNA KEQNNQNAPQ DFNPYISSDR 
361:	AFAQNMLNRA QAQAKMLSLA DQMKKDLSTI PSQFVSNYLA ACKNGGGTLP NEGVTSNTWG 
421:	AGCAYVEETT TALNNSLAHF GTQAEQIKQS ELLARTILDF RGSLSNLNNT YNSITTTASN 
481:	TPNSPFLKNL ISQSTNPNNP GGLQAVYQVN QSAYSQLLSA TQELGHNPFR RFGLISSQTN 
541:	NGAMNGIGVQ VGYKQFFGEK RRWGLRYYGF FDYNHAYIKS SFFNSASDVF TYGVGTDVLY 
601:	NFINDKATKN NKISFGVFGG IALAGTSWLN SQYVNLATFN NFYSAKMNVA NFQFLFNLGL 
661:	RMNLARNKKK ASDHAAQHGM ELGVKIPTIN TNYYSLLGTQ LQYRRLYSVY LNYVFAY